Transcript: lnc-MAMDC4-2:1

Basic information

LNCipedia transcript ID: lnc-MAMDC4-2:1 
LNCipedia gene ID: lnc-MAMDC4-2
Location (hg19): chr9:139777458-139779043
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1586 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc010nco_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.7201 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAMDC4-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAMDC4-2:1
4.0 lnc-MAMDC4-2:1
4.1 lnc-MAMDC4-2:1
5.0 lnc-MAMDC4-2:1
5.1 lnc-GPSM1-23:1
5.2 lnc-MAMDC4-2:1