Transcript: lnc-MAMSTR-1:2

Basic information

LNCipedia transcript ID: lnc-MAMSTR-1:2 
LNCipedia gene ID: lnc-MAMSTR-1
RefSeq ID: NR_131188
Location (hg19): chr19:49205707-49207105
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1399 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131188.1
Alternative gene names: LOC105447645


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 253.8005 coding 
CPAT coding probability 94.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAMSTR-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TMEM143-17:2
5.1 lnc-TMEM143-17:2
5.2 lnc-MAMSTR-1:2