Transcript: lnc-MAN2C1-6:4

Basic information

LNCipedia transcript ID: lnc-MAN2C1-6:4 
LNCipedia gene ID: lnc-MAN2C1-6
Location (hg19): chr15:75637930-75639916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1987 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025570.1|ENCT00000151015.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.4671 non-coding 
CPAT coding probability 16.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAN2C1-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAN2C1-6:4
5.0 lnc-MAN2C1-6:4
5.1 lnc-PEAK1-40:2
5.2 lnc-MAN2C1-6:4