Transcript: lnc-MAN2C1-6:5

Basic information

LNCipedia transcript ID: lnc-MAN2C1-6:5 
LNCipedia gene ID: lnc-MAN2C1-6
Location (hg19): chr15:75638995-75639916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 818 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025570.1|MICT00000119817.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.2789 non-coding 
CPAT coding probability 17.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAN2C1-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAN2C1-6:5
5.0 lnc-MAN2C1-6:5
5.1 lnc-PEAK1-40:3
5.2 lnc-MAN2C1-6:5