Transcript: lnc-MAP1LC3B2-4:7

Basic information

LNCipedia transcript ID: lnc-MAP1LC3B2-4:7 
LNCipedia gene ID: lnc-MAP1LC3B2-4
Location (hg19): chr12:115515130-115521152
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2040 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT030903
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.2453 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP1LC3B2-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-116D17.1.1-4:2
4.0 lnc-RP11-116D17.1.1-4:2
4.1 lnc-RP11-116D17.1.1-4:2
5.0 lnc-RP11-116D17.1.1-4:2
5.1 lnc-MAP1LC3B2-4:5
5.2 lnc-MAP1LC3B2-4:7