Transcript: lnc-MAP2K4-3:4

Basic information

LNCipedia transcript ID: lnc-MAP2K4-3:4 
LNCipedia gene ID: lnc-MAP2K4-3
Location (hg19): chr17:12125156-12298574
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2997 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000179136.2|MICT00000141953.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.1349 non-coding 
CPAT coding probability 6.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP2K4-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP2K4-3:4
5.0 lnc-MAP2K4-3:4
5.1 lnc-GLP2R-19:4
5.2 lnc-MAP2K4-3:4