Transcript: lnc-MAP3K12-4:1

Basic information

LNCipedia transcript ID: lnc-MAP3K12-4:1 
LNCipedia gene ID: lnc-MAP3K12-4
Location (hg19): chr12:53834617-53835243
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 627 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012034.1|ENCT00000102187.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.9592 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K12-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K12-4:1
5.0 lnc-MAP3K12-4:1
5.1 lnc-MAP3K12-4:1
5.2 lnc-MAP3K12-4:1