Transcript: lnc-MAP3K8-20:1

Basic information

LNCipedia transcript ID: lnc-MAP3K8-20:1 
LNCipedia gene ID: lnc-MAP3K8-20
Location (hg19): chr10:31649884-31650144
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 261 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT012618
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 44.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAP3K8-20:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP3K8-20:1
4.0 lnc-MAP3K8-20:1
4.1 lnc-MAP3K8-20:1
5.0 lnc-MAP3K8-20:1
5.1 lnc-NPY4R2-188:1
5.2 lnc-MAP3K8-20:1