Transcript: lnc-MAP3K8-22:1

Basic information

LNCipedia transcript ID: lnc-MAP3K8-22:1 
LNCipedia gene ID: lnc-MAP3K8-22
RefSeq ID: NR_120653
Location (hg19): chr10:30500781-30521619
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2042 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120653; NR_120653.1
Alternative gene names: LOC101929279


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.933 non-coding 
CPAT coding probability 15.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K8-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP3K8-22:1
4.0 lnc-MAP3K8-22:1
4.1 lnc-MAP3K8-22:1
5.0 lnc-MAP3K8-22:1
5.1 lnc-NPY4R2-208:1
5.2 lnc-MAP3K8-22:1