Transcript: lnc-MAPK6-11:1

Basic information

LNCipedia transcript ID: lnc-MAPK6-11:1 
LNCipedia gene ID: lnc-MAPK6-11
Location (hg19): chr15:53084847-53087549
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1042 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023411; NONHSAT043948
Alternative gene names: XLOC_011257; linc-UNC13C-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.6445 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAPK6-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAPK6-6:1
3.1 lnc-MAPK6-11:1
4.0 lnc-MAPK6-11:1
4.1 lnc-MAPK6-11:1
5.0 lnc-MAPK6-11:1
5.1 lnc-CCNDBP1-131:1
5.2 lnc-MAPK6-11:1