Transcript: lnc-MARCH7-1:6

Basic information

LNCipedia transcript ID: lnc-MARCH7-1:6 
LNCipedia gene ID: lnc-MARCH7-1
Location (hg19): chr2:160471854-160475539
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3686 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224152.1|HBMT00000779852.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.6127 non-coding 
CPAT coding probability 3.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCH7-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MARCH7-1:6
5.0 lnc-MARCH7-1:6
5.1 lnc-TANC1-11:6
5.2 lnc-MARCH7-1:6