Transcript: lnc-MARCKS-13:1

Basic information

LNCipedia transcript ID: lnc-MARCKS-13:1 
LNCipedia gene ID: lnc-MARCKS-13
Location (hg19): chr6:114419866-114423661
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 529 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3239_chr6:114419865-114423661_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -290.2041 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCKS-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCKS-13:1
4.0 lnc-MARCKS-13:1
4.1 lnc-MARCKS-13:1
5.0 lnc-MARCKS-13:1
5.1 lnc-RFPL4B-22:1
5.2 lnc-MARCKS-13:1