Transcript: lnc-MAST4-5:4

Basic information

LNCipedia transcript ID: lnc-MAST4-5:4 
LNCipedia gene ID: lnc-MAST4-5
Location (hg19): chr5:67088909-67093429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 464 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT101820
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.4558 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAST4-5:4 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-404L6.2.1-1:8
4.0 lnc-MAST4-5:4
4.1 lnc-MAST4-5:4
5.0 lnc-MAST4-5:4
5.1 lnc-NLN-35:5
5.2 lnc-MAST4-5:4