Transcript: lnc-MAST4-6:2

Basic information

LNCipedia transcript ID: lnc-MAST4-6:2 
LNCipedia gene ID: lnc-MAST4-6
Location (hg19): chr5:66510104-66539030
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1456 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076143.1|ENCT00000345203.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.3203 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAST4-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAST4-6:2
5.0 lnc-MAST4-6:2
5.1 lnc-NLN-32:2
5.2 lnc-MAST4-6:2