Transcript: lnc-MAST4-6:4

Basic information

LNCipedia transcript ID: lnc-MAST4-6:4 
LNCipedia gene ID: lnc-MAST4-6
Location (hg19): chr5:66510104-66561436
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1699 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076143.1|MICT00000283512.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.9147 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAST4-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAST4-6:4
5.0 lnc-MAST4-6:4
5.1 lnc-NLN-32:4
5.2 lnc-MAST4-6:4