Transcript: lnc-MBOAT4-1:1

Basic information

LNCipedia transcript ID: lnc-MBOAT4-1:1 
LNCipedia gene ID: lnc-MBOAT4-1
Ensembl Gene ID: ENSG00000253708
Ensembl Transcript ID: ENST00000523733
Location (hg19): chr8:30034070-30038404
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 583 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523733.1; RP11-51J9.4-001; OTTHUMT00000375847.1; NONHSAT125846
Alternative gene names: ENSG00000253708.1; RP11-51J9.4; OTTHUMG00000163830.1; AC026979.2; AC026979.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.6278 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBOAT4-1:1
4.0 lnc-MBOAT4-1:1
4.1 lnc-MBOAT4-1:1
5.0 lnc-MBOAT4-1:1
5.1 lnc-PURG-20:1
5.2 lnc-MBOAT4-1:1