Transcript: lnc-MCEE-1:1

Basic information

LNCipedia transcript ID: lnc-MCEE-1:1 
LNCipedia gene ID: lnc-MCEE-1
Ensembl Gene ID: ENSG00000272735
Ensembl Transcript ID: ENST00000608897
Location (hg19): chr2:71294649-71295255
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 607 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608897.1
Alternative gene names: ENSG00000272735.1; RP11-467P9.1; AC007881.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -480.3991 non-coding 
CPAT coding probability 4.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCEE-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MCEE-1:1
4.0 lnc-MCEE-1:1
4.1 lnc-MCEE-1:1
5.0 lnc-MCEE-1:1
5.1 lnc-GKN2-46:3
5.2 lnc-MCEE-1:1