Transcript: lnc-MCF2L-1:1

Basic information

LNCipedia transcript ID: lnc-MCF2L-1:1 
LNCipedia gene ID: lnc-MCF2L-1
Location (hg19): chr13:113517894-113521222
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1706 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000506034
Alternative gene names: ENSG00000248470; AL356752.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.7661 non-coding 
CPAT coding probability 49.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MCF2L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MCF2L-1:1
3.1 lnc-MCF2L-1:1
4.0 lnc-MCF2L-1:1
4.1 lnc-MCF2L-1:1
5.0 lnc-MCF2L-1:1
5.1 lnc-SPACA7-15:1
5.2 lnc-MCF2L-1:1