Transcript: lnc-MDFIC2-6:2

Basic information

LNCipedia transcript ID: lnc-MDFIC2-6:2 
LNCipedia gene ID: lnc-MDFIC2-6
Location (hg19): chr3:70246077-70255942
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 483 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000497551.2; RP11-231I13.2-201
Alternative gene names: ENSG00000242120.2; RP11-231I13.2; OTTHUMG00000158801.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 956.1789 coding 
CPAT coding probability 27.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MDFIC2-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRMD4B-2:2
4.0 lnc-FOXP1-6:2
4.1 lnc-FOXP1-6:2
5.0 lnc-FOXP1-6:2
5.1 lnc-FOXP1-15:2
5.2 lnc-MDFIC2-6:2