Transcript: lnc-MECOM-1:1

Basic information

LNCipedia transcript ID: lnc-MECOM-1:1 
LNCipedia gene ID: lnc-MECOM-1
Location (hg19): chr3:168746750-168749572
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 335 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006707; NONHSAT093144
Alternative gene names: XLOC_003322; linc-GOLIM4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.1167 non-coding 
CPAT coding probability 11.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MECOM-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MECOM-1:1
3.1 lnc-MECOM-1:1
4.0 lnc-MECOM-1:1
4.1 lnc-MECOM-1:1
5.0 lnc-MECOM-1:1
5.1 lnc-TBL1XR1-64:1
5.2 lnc-MECOM-1:1