Transcript: lnc-MED20-5:5

Basic information

LNCipedia transcript ID: lnc-MED20-5:5 
LNCipedia gene ID: lnc-MED20-5
Location (hg19): chr6:41905451-42016426
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 476 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT112784
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -353.4169 non-coding 
CPAT coding probability 88.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MED20-5:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MED20-5:5
4.0 lnc-MED20-5:5
4.1 lnc-MED20-5:5
5.0 lnc-MED20-5:5
5.1 lnc-TREML2-35:5
5.2 lnc-MED20-5:5