Transcript: lnc-MEF2A-5:2

Basic information

LNCipedia transcript ID: lnc-MEF2A-5:2 
LNCipedia gene ID: lnc-MEF2A-5
Location (hg19): chr15:100312611-100314080
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1129 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1249_NR_026819
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.2287 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEF2A-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2054N24.2.1-5:1
4.0 lnc-CTD-2054N24.2.1-5:1
4.1 lnc-CTD-2054N24.2.1-5:1
5.0 lnc-CTD-2054N24.2.1-5:1
5.1 lnc-ARRDC4-47:1
5.2 lnc-MEF2A-5:2