Transcript: lnc-MEI4-3:1

Basic information

LNCipedia transcript ID: lnc-MEI4-3:1 
LNCipedia gene ID: lnc-MEI4-3
Ensembl Gene ID: ENSG00000271945
Ensembl Transcript ID: ENST00000607287
Location (hg19): chr6:77484700-77485577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 786 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607287.1
Alternative gene names: ENSG00000271945.1; RP11-354K4.2; AL590426.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.7148 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEI4-3:1 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYO6-3:4
4.0 lnc-MYO6-3:4
4.1 lnc-MYO6-3:4
5.0 lnc-MYO6-3:4
5.1 lnc-CYB5R4-59:1
5.2 lnc-MEI4-3:1