Transcript: lnc-MEIS2-6:1

Basic information

LNCipedia transcript ID: lnc-MEIS2-6:1 
LNCipedia gene ID: lnc-MEIS2-6
Location (hg19): chr15:36606146-36619385
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023625; NONHSAT041649
Alternative gene names: XLOC_011424; linc-ATPBD4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.6781 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEIS2-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEIS2-4:1
3.1 lnc-MEIS2-6:1
4.0 lnc-MEIS2-6:1
4.1 lnc-MEIS2-6:1
5.0 lnc-MEIS2-6:1
5.1 lnc-NANOGP8-9:1
5.2 lnc-MEIS2-6:1