Transcript: lnc-MEP1A-5:2

Basic information

LNCipedia transcript ID: lnc-MEP1A-5:2 
LNCipedia gene ID: lnc-MEP1A-5
Location (hg19): chr6:47102641-47106511
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 968 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083989.1|MICT00000304702.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -197.5655 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEP1A-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MEP1A-5:2
5.0 lnc-MEP1A-5:2
5.1 lnc-EFHC1-47:2
5.2 lnc-MEP1A-5:2