Transcript: lnc-MEP1B-1:8

Basic information

LNCipedia transcript ID: lnc-MEP1B-1:8 
LNCipedia gene ID: lnc-MEP1B-1
Ensembl Gene ID: ENSG00000263765
Ensembl Transcript ID: ENST00000579160
Location (hg19): chr18:30415063-30416276
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579160.1; RP11-746B8.1-004; OTTHUMT00000448448.1; NONHSAT058874
Alternative gene names: ENSG00000263765.1; RP11-746B8.1; OTTHUMG00000179835.3; ENSG00000263765.5; AC090371.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.4761 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEP1B-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012123.1.1-1:4
4.0 lnc-AC012123.1.1-1:4
4.1 lnc-AC012123.1.1-1:4
5.0 lnc-AC012123.1.1-1:4
5.1 lnc-RIOK3-114:7
5.2 lnc-MEP1B-1:8