Transcript: lnc-MFHAS1-2:2

Basic information

LNCipedia transcript ID: lnc-MFHAS1-2:2 
LNCipedia gene ID: lnc-MFHAS1-2
Location (hg19): chr8:8845884-8860681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 693 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT124902
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.6978 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFHAS1-2:2 no no no no

Available literature

  1. Giallourakis (2013), Genome-wide analysis of immune system genes by expressed sequence Tag profiling., J. Immunol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFHAS1-2:2
4.0 lnc-MFHAS1-2:2
4.1 lnc-MFHAS1-2:2
5.0 lnc-MFHAS1-2:2
5.1 lnc-PINX1-57:1
5.2 lnc-MFHAS1-2:2