Transcript: lnc-MFN1-1:2

Basic information

LNCipedia transcript ID: lnc-MFN1-1:2 
LNCipedia gene ID: lnc-MFN1-1
Ensembl Gene ID: ENSG00000242539
Ensembl Transcript ID: ENST00000600539
Location (hg19): chr3:179114749-179116979
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1697 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT093396; ENST00000600539.1
Alternative gene names: ENSG00000242539.2; AC007620.3; AC007620.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.1716 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFN1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFN1-1:2
4.0 lnc-MFN1-1:2
4.1 lnc-MFN1-1:2
5.0 lnc-MFN1-1:2
5.1 lnc-PIK3CA-5:1
5.2 lnc-MFN1-1:2