Transcript: lnc-MFSD1-1:3

Basic information

LNCipedia transcript ID: lnc-MFSD1-1:3 
LNCipedia gene ID: lnc-MFSD1-1
Location (hg19): chr3:158586304-158587531
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 589 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT092954; FPKM1_group_22282_transcript_6
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.9197 non-coding 
CPAT coding probability 14.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFSD1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFSD1-1:3
4.0 lnc-MFSD1-1:3
4.1 lnc-MFSD1-1:3
5.0 lnc-MFSD1-1:3
5.1 lnc-IQCJ-SCHIP1-1:2
5.2 lnc-MFSD1-1:3