Transcript: lnc-MFSD8-12:2

Basic information

LNCipedia transcript ID: lnc-MFSD8-12:2 
LNCipedia gene ID: lnc-MFSD8-12
Location (hg19): chr4:128800427-128802327
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1901 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073723.1|FTMT21400006804.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.6422 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFSD8-12:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MFSD8-12:2
5.0 lnc-MFSD8-12:2
5.1 lnc-TRPC3-30:2
5.2 lnc-MFSD8-12:2