Transcript: lnc-MFSD8-6:11

Basic information

LNCipedia transcript ID: lnc-MFSD8-6:11 
LNCipedia gene ID: lnc-MFSD8-6
Location (hg19): chr4:127471682-127656678
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 12851 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073694.1|ENCT00000335696.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.5489 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFSD8-6:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MFSD8-6:11
5.0 lnc-MFSD8-6:11
5.1 lnc-TRPC3-22:10
5.2 lnc-MFSD8-6:11