Transcript: lnc-MFSD9-20:2

Basic information

LNCipedia transcript ID: lnc-MFSD9-20:2 
LNCipedia gene ID: lnc-MFSD9-20
Location (hg19): chr2:103128344-103130672
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2329 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049492.1|ENCT00000245955.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 267.4116 coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MFSD9-20:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MFSD9-20:2
5.0 lnc-MFSD9-20:2
5.1 lnc-AFF3-51:4
5.2 lnc-MFSD9-20:2