Transcript: lnc-MGAT1-3:9

Basic information

LNCipedia transcript ID: lnc-MGAT1-3:9 
LNCipedia gene ID: lnc-MGAT1-3
Location (hg19): chr5:180235844-180236875
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 745 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105817
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.5645 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAT1-3:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP62-3:9
4.0 lnc-MGAT1-3:9
4.1 lnc-MGAT1-3:9
5.0 lnc-MGAT1-3:9
5.1 lnc-OR2Y1-4:9
5.2 lnc-MGAT1-3:9