Transcript: lnc-MGST1-1:1

Basic information

LNCipedia transcript ID: lnc-MGST1-1:1 
LNCipedia gene ID: lnc-MGST1-1
Location (hg19): chr12:16846734-16848911
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2073 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000418574; ENST00000418574.2; RP11-69C13.1-001; OTTHUMT00000401401.1; NONHSAT027163
Alternative gene names: ENSG00000255871; RP11-69C13.1; ENSG00000255871.1; OTTHUMG00000168856.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.693 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGST1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MGST1-1:1
3.1 lnc-MGST1-1:1
4.0 lnc-MGST1-1:1
4.1 lnc-MGST1-1:1
5.0 lnc-MGST1-1:1
5.1 lnc-BCL2L14-78:1
5.2 lnc-MGST1-1:1