Transcript: lnc-MGST1-5:1

Basic information

LNCipedia transcript ID: lnc-MGST1-5:1 
LNCipedia gene ID: lnc-MGST1-5
Location (hg19): chr12:16705963-16794021
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 240 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_616_chr12:16705962-16794021_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.9343 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGST1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MGST1-5:1
4.0 lnc-MGST1-5:1
4.1 lnc-MGST1-5:1
5.0 lnc-MGST1-5:1
5.1 lnc-BCL2L14-77:1
5.2 lnc-MGST1-5:1