Transcript: lnc-MID1IP1-3:1

Basic information

LNCipedia transcript ID: lnc-MID1IP1-3:1 
LNCipedia gene ID: lnc-MID1IP1-3
Location (hg19): chrX:38782353-38796758
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017154; NONHSAT136659
Alternative gene names: XLOC_007956; linc-ATP6AP2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.4154 non-coding 
CPAT coding probability 11.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MID1IP1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MID1IP1-3:1
3.1 lnc-MID1IP1-3:1
4.0 lnc-MID1IP1-3:1
4.1 lnc-MID1IP1-3:1
5.0 lnc-MID1IP1-3:1
5.1 lnc-CHST7-90:1
5.2 lnc-MID1IP1-3:1