Transcript: lnc-MIEN1-1:1

Basic information

LNCipedia transcript ID: lnc-MIEN1-1:1 
LNCipedia gene ID: lnc-MIEN1-1
Location (hg19): chr17:37913974-37920089
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 6116 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000488188.2; RP11-94L15.2-001; OTTHUMT00000446829.1; NONHSAT053482
Alternative gene names: ENSG00000264198.1; RP11-94L15.2; OTTHUMG00000179517.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.6529 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MIEN1-1:1 no no no no

Available literature

  1. Zhou (2015), A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer., J Transl Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MIEN1-1:1
4.0 lnc-MIEN1-1:1
4.1 lnc-MIEN1-1:1
5.0 lnc-MIEN1-1:1
5.1 lnc-MED24-12:1
5.2 lnc-MIEN1-1:1