Transcript: lnc-MINDY4B-1:1

Basic information

LNCipedia transcript ID: lnc-MINDY4B-1:1 
LNCipedia gene ID: lnc-MINDY4B-1
Location (hg19): chr3:150588832-150612089
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1071 bp
Exons: 9
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000397891
Alternative gene names: ENSG00000214237; RP11-166N6.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2334.8034 coding 
CPAT coding probability 99.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MINDY4B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-166N6.3.1-1:1
3.1 lnc-RP11-166N6.3.1-1:1
4.0 lnc-FAM188B2-1:2
4.1 lnc-FAM188B2-1:2
5.0 lnc-FAM188B2-1:2
5.1 lnc-SIAH2-4:1
5.2 lnc-MINDY4B-1:1