Transcript: lnc-MKKS-7:1

Basic information

LNCipedia transcript ID: lnc-MKKS-7:1 
LNCipedia gene ID: lnc-MKKS-7
Location (hg19): chr20:10625847-10627014
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 568 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT078599; ENST00000488480.1
Alternative gene names: ENSG00000270408.1; JAG1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -399.4048 non-coding 
CPAT coding probability 43.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MKKS-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MKKS-7:1
4.0 lnc-MKKS-7:1
4.1 lnc-MKKS-7:1
5.0 lnc-MKKS-7:1
5.1 lnc-MKKS-7:1
5.2 lnc-MKKS-7:1