Transcript: lnc-MKLN1-18:4

Basic information

LNCipedia transcript ID: lnc-MKLN1-18:4 
LNCipedia gene ID: lnc-MKLN1-18
Ensembl Gene ID: ENSG00000225144
Ensembl Transcript ID: ENST00000445459
Location (hg19): chr7:131948911-131956028
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 414 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT123428; ENST00000445459.2
Alternative gene names: ENSG00000225144.2; AC018643.4; AC018643.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1014.2091 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MKLN1-18:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC009365.3.1-5:3
4.0 lnc-AC009365.3.1-5:3
4.1 lnc-AC009365.3.1-5:3
5.0 lnc-AC009365.3.1-5:3
5.1 lnc-CPA1-18:4
5.2 lnc-MKLN1-18:4