Transcript: lnc-MLLT6-1:1

Basic information

LNCipedia transcript ID: lnc-MLLT6-1:1 
LNCipedia gene ID: lnc-MLLT6-1
Ensembl Gene ID: ENSG00000277969
Ensembl Transcript ID: ENST00000612330
Location (hg19): chr17:36858705-36861000
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2296 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563897.1; CTB-58E17.1-001; OTTHUMT00000431409.1; NONHSAT053349; ENST00000612330.1
Alternative gene names: ENSG00000261005.1; CTB-58E17.1; OTTHUMG00000176036.1; ENSG00000277969.1; AC006449.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.6444 non-coding 
CPAT coding probability 25.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MLLT6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MLLT6-1:1
4.0 lnc-MLLT6-1:1
4.1 lnc-MLLT6-1:1
5.0 lnc-MLLT6-1:1
5.1 lnc-RPL19-19:1
5.2 lnc-MLLT6-1:1