Transcript: lnc-MLYCD-2:6

Basic information

LNCipedia transcript ID: lnc-MLYCD-2:6 
LNCipedia gene ID: lnc-MLYCD-2
Location (hg19): chr16:83964951-83966309
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 533 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000563248.1; RP11-505K9.4-003; OTTHUMT00000433897.1
Alternative gene names: ENSG00000260300.1; RP11-505K9.4; OTTHUMG00000176811.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.3223 non-coding 
CPAT coding probability 17.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MLYCD-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OSGIN1-1:6
4.0 lnc-MLYCD-2:6
4.1 lnc-MLYCD-2:6
5.0 lnc-MLYCD-2:6
5.1 lnc-CRISPLD2-37:6
5.2 lnc-MLYCD-2:6