Transcript: lnc-MMP10-3:1

Basic information

LNCipedia transcript ID: lnc-MMP10-3:1 
LNCipedia gene ID: lnc-MMP10-3
Location (hg19): chr11:102668128-102668877
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 262 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT023896
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.694 non-coding 
CPAT coding probability 5.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMP10-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMP10-3:1
4.0 lnc-MMP10-3:1
4.1 lnc-MMP10-3:1
5.0 lnc-MMP10-3:1
5.1 lnc-MMP8-3:1
5.2 lnc-MMP10-3:1