Transcript: lnc-MNAT1-2:1

Basic information

LNCipedia transcript ID: lnc-MNAT1-2:1 
LNCipedia gene ID: lnc-MNAT1-2
Location (hg19): chr14:61119171-61122614
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 240 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022526; NONHSAT037230
Alternative gene names: XLOC_010851; linc-MNAT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.1709 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MNAT1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MNAT1-1:1
3.1 lnc-MNAT1-2:1
4.0 lnc-MNAT1-2:1
4.1 lnc-MNAT1-2:1
5.0 lnc-MNAT1-2:1
5.1 lnc-ACTR10-46:1
5.2 lnc-MNAT1-2:1