Transcript: lnc-MOCS3-3:1

Basic information

LNCipedia transcript ID: lnc-MOCS3-3:1 
LNCipedia gene ID: lnc-MOCS3-3
Location (hg19): chr20:49752748-49759296
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 232 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028218; NONHSAT080336
Alternative gene names: XLOC_013564; linc-TSHZ2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -397.7634 non-coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MOCS3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MOCS3-2:1
3.1 lnc-MOCS3-3:1
4.0 lnc-MOCS3-3:1
4.1 lnc-MOCS3-3:1
5.0 lnc-MOCS3-3:1
5.1 lnc-SNAI1-40:6
5.2 lnc-MOCS3-3:1