Transcript: lnc-MOCS3-3:6

Basic information

LNCipedia transcript ID: lnc-MOCS3-3:6 
LNCipedia gene ID: lnc-MOCS3-3
Location (hg19): chr20:49745878-49765151
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7336 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053591.1|MICT00000219907.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.1046 non-coding 
CPAT coding probability 8.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MOCS3-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MOCS3-3:6
5.0 lnc-MOCS3-3:6
5.1 lnc-SNAI1-40:5
5.2 lnc-MOCS3-3:6