Transcript: lnc-MON2-2:4

Basic information

LNCipedia transcript ID: lnc-MON2-2:4 
LNCipedia gene ID: lnc-MON2-2
Location (hg19): chr12:62996532-63007855
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000550290.1; RP11-631N16.2-001; OTTHUMT00000406759.1; NONHSAT029091
Alternative gene names: ENSG00000257354.1; RP11-631N16.2; OTTHUMG00000169989.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.0294 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MON2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MON2-1:1
4.0 lnc-MON2-2:4
4.1 lnc-MON2-2:4
5.0 lnc-MON2-2:4
5.1 lnc-RXYLT1-13:4
5.2 lnc-MON2-2:4