Transcript: lnc-MPG-2:1

Basic information

LNCipedia transcript ID: lnc-MPG-2:1 
LNCipedia gene ID: lnc-MPG-2
Ensembl Gene ID: ENSG00000269482
Ensembl Transcript ID: ENST00000601483
Location (hg19): chr16:140629-141100
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 472 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT051744; ENST00000601483.1
Alternative gene names: ENSG00000269482.1; Z69720.2; Z69720.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.4186 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPG-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPG-2:1
4.0 lnc-MPG-2:1
4.1 lnc-MPG-2:1
5.0 lnc-MPG-2:1
5.1 lnc-DNASE1L2-121:1
5.2 lnc-MPG-2:1