Transcript: lnc-MPHOSPH8-9:4

Basic information

LNCipedia transcript ID: lnc-MPHOSPH8-9:4 
LNCipedia gene ID: lnc-MPHOSPH8-9
Location (hg19): chr13:19174124-19187652
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 416 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000456756.1; RP11-484H12.1-001; OTTHUMT00000043979.1; NONHSAT032190
Alternative gene names: ENSG00000230473.1; RP11-484H12.1; OTTHUMG00000016456.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.4138 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPHOSPH8-9:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-408E5.4.1-9:1
4.0 lnc-RP11-408E5.4.1-9:1
4.1 lnc-RP11-408E5.4.1-9:1
5.0 lnc-RP11-408E5.4.1-9:1
5.1 lnc-GTF3A-161:1
5.2 lnc-MPHOSPH8-9:4