Transcript: lnc-MPLKIP-6:1

Basic information

LNCipedia transcript ID: lnc-MPLKIP-6:1 
LNCipedia gene ID: lnc-MPLKIP-6
Ensembl Gene ID: ENSG00000231951
Ensembl Transcript ID: ENST00000420748
Location (hg19): chr7:39649209-39649889
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420748.1; AC004837.4-001; OTTHUMT00000339277.1; NONHSAT120211
Alternative gene names: ENSG00000231951.1; AC004837.4; OTTHUMG00000155272.1; AC004837.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.2806 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPLKIP-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf11-6:1
4.0 lnc-C7orf11-6:1
4.1 lnc-C7orf11-6:1
5.0 lnc-C7orf11-6:1
5.1 lnc-SFRP4-26:1
5.2 lnc-MPLKIP-6:1